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データベースSOAP
データベースリスト
東京理科大の開発するメタデータベースです。
主要なバイオ関連データベースを網羅し、データの種類、所在や検索パラメータ(GUI)をデータベース化しています。
利用者は、世界中に散在するデータベースの中から、データの種類と目的に応じて最適なデータベースを見つけることができます。
フィールドの指定を行わずデータベース全体へ検索を行います。
フィールド毎にキーワードを指定できます。
データベース
検索のヒント
(e.g. DDBJ)
概要(PubMed ID、Abstractを含む)
検索のヒント
(e.g. アミノ酸)
データベースカテゴリ
検索のヒント
any
literature
nucleotide
others
protein
Structure
(e.g. nucleotide)
生物種
検索のヒント
any
A.burtoni (Astatotilapia burtoni)
Acetabularia cliftonii
Acinetobacter sp ADP1
Adiantum capillus-veneris
Aedes aegypti
Aeropyrum pernix K1
African clawed frog (Xenopus laevis)
Agrobacterium tumefaciens C58
Amblyomma variegatum
Anabaena sp. PCC 7120
Anaplasma marginale St. Maries
Animals
Anopheles gambiae
Antirrhinum majus
Apis Aedes_aegypti
Apis mellifera
Aquifex aeolicus VF5
Arabidopsis
Arabidopsis thaliana
Arachis hypogaea
Archaea
Archaeoglobus fulgidus (strain DSM 4304 ...
Arthropoda
Aspergillus clavatus
Aspergillus flavus
Aspergillus fumigatus
Aspergillus nidulans
Aspergillus niger
Avena sativa
Azoarcus sp. EbN1
B.subtilis
Babesia bovis
Bacillus anthracis (strain Ames / isolat...
Bacillus anthracis Ames
Bacillus anthracis Ames 0581
Bacillus anthracis Sterne
Bacillus cereus (strain ATCC 14579 / DSM...
Bacillus cereus (strain ZK)
Bacillus cereus ATCC 10987
Bacillus clausii (strain KSM-K16)
Bacillus halodurans
Bacillus halodurans C125
Bacillus licheniformis (strain DSM 13 / ...
Bacillus licheniformis DSM 13 (Goettinge...
Bacillus subtilis
Bacillus subtilis (strain 168)
Bacteria
Bacteroides fragilis (strain ATCC 25285 ...
Bacteroides fragilis (strain YCH46)
Bacteroides thetaiotaomicron
Bacteroides thetaiotaomicron (strain ATC...
Bakers yeast (Saccharomyes cerevisiae)
Barley
Barley (Hordeum vulgare)
Bartonella henselae (strain Houston 1 / ...
Bartonella quintana (strain Toulouse)
Bdellovibrio bacteriovorus (strain DSM 5...
Beet (Beta vulgaris)
Beta vulgaris
Bifidobacterium longum
Bifidobacterium longum (strain NCC 2705)
Blochmannia floridanus
Boophilus Microplus
Bordetella bronchiseptica RB50
Bordetella parapertussis 12822
Bordetella pertussis Tohama I
Borrelia burgdorferi B31
Borrelia garinii PBi
Bos taurus
Bos_taurus
Bradyrhizobium japonicum
Bradyrhizobium japonicum USDA 110
Brassica juncea
Brassica napus
Brassica napus var. rapifera
Brassica oleracea
Brassica oleracea var. alboglabra
Brassica rapa
Brucella abortus (biovar 1 strain 9-941)
Brucella melitensis
Brucella melitensis 16M
Brucella suis
Brucella suis 1330
Brugia malayi
Buchnera aphidicola (subsp. Acyrthosipho...
Buchnera aphidicola (subsp. Baizongia pi...
Buchnera aphidicola (subsp. Schizaphis g...
Buchnera aphidicola APS
Buchnera aphidicola APS (Acyrthosiphon p...
Buchnera aphidicola APS (Acyrthosiphon p...
Buchnera aphidicola Bp
Buchnera aphidicola Sg
Burkholderia mallei ATCC 23344
Burkholderia pseudomallei K96243
C. elegans
C. glabrata
C. hominis
C. parvum
C.elegans
Caenorhabditis briggsae
Caenorhabditis elegans
Caenorhabditis elegans/Caenorhabditis br...
Campylobacter jejuni (strain NCTC 11168)
Campylobacter jejuni (strain RM1221)
Candida glabrata
Candidatus Blochmannia floridanus
Canis familiaris
Canis lupus familiaris
Canis_familiaris
Capsicum annuum
Catfish
Catfish (Ictalurus punctatus)
Catharanthus roseus
Cattle
Cattle (Bos taurus)
Caulobacter crescentus
Caulobacter crescentus (strain CB15 / AT...
Ceratodon purpureus
chicken
Chlamydia muridarum (strain MoPn / Nigg)
Chlamydia pneumoniae (strain AR39)
Chlamydia pneumoniae (strain CWL029)
Chlamydia pneumoniae (strain J138)
Chlamydia pneumoniae (strain TW-183)
Chlamydia trachomatis D-UW-3-CX
Chlamydomonas eugametos
Chlamydomonas reinhardtii
Chlamydophila abortus (strain S26/3)
Chlamydophila caviae GPIC
Chlorobium tepidum (strain TLS / ATCC 49...
Chloroplast Spinacia oleracea
Chromobacterium violaceum (strain ATCC 1...
Cicer arietinum
Ciona intestinalis
Clam (Spisula solidissima)
Clostridium acetobutylicum (strain DSM 7...
Clostridium perfringens (strain 13 / Typ...
Clostridium tetani Massachusetts E88
Coccidioides immitis
Cocoa (Theobroma cacao)
Corynebacterium diphtheriae NCTC13129
Corynebacterium efficiens
Corynebacterium efficiens (strain DSM 44...
Corynebacterium glutamicum
Corynebacterium glutamicum (strain DSM 2...
Corynebacterium glutamicum (strain DSM 2...
Cotton
Cotton (Gossypium)
Coxiella burnetii (strain Nine Mile phas...
Craterostigma plantagineum
Cryptococcus neoformans
Cryptococcus sp.
Cryptosporidium hominis
Cryptosporidium parvum
Cucumis sativus
Cucurbita pepo
D. hansenii
Daino rerio
Danio rerio
Daucus carota
Debaryomyces hansenii
Deinococcus radiodurans
Deinococcus radiodurans (strain DSM 2053...
Desulfotalea psychrophila (strain LSv54 ...
Desulfovibrio vulgaris (strain Hildenbor...
Dictyostelium discoideum
Dog
Dog (Canis familiaris)
Drosophila
Drosophila melanogaster
Drosophila pseudoobscura
Dunaliella tertiolecta
E. coli
E.coli K12
Ehrlichia ruminantium (strain Gardel)
Ehrlichia ruminantium (strain Welgevonde...
Ehrlichia ruminantium (strain Welgevonde...
Eimeria tenella
Encephalitozoon cuniculi
Entamoeba histolytica
Enterococcus faecalis
Enterococcus faecalis (strain V583 / ATC...
Equus caballus
Eremothecium gossypii
Escherichia coli
Escherichia coli (strain EDL933 / ATCC 7...
Escherichia coli (strain Sakai / O157:H7...
Escherichia coli CFT073
Escherichia coli K-12
Escherichia coli K-12 MG1655
Escherichia coli K-12 W3110
Escherichia coli O157:H7
Escherichia coli O157:H7 EDL933
Escherichia coli O157:H7 RIMD 0509952 (S...
Escherichia coli O157:H7 RIMD 0509952 (S...
Escherichia coli O157:H7 RIMD 0509952 (S...
Escherichia coli O6 (strain UPEC / O6:H1...
EST
Eukaryotes
Felis catus
Fission yeast
Fission yeast (Schizosaccharomyces pombe...
Fragaria x ananassa
Francisella tularensis
Francisella tularensis (subsp. tularensi...
Frog
Fugu (Takifugu)
Fugu rubripe
Fugu rubripes
Fungi
Fusarium verticillioides
Fusobacterium nucleatum (subsp. nucleatu...
Gallus gallus
Geobacillus kaustophilus HTA426
Geobacter sulfurreducens PCA
Giardia intestinalis
Gibberella zeae
Gloeobacter violaceus PCC 7421
Gluconobacter oxydans (strain 621H)
Glycine max
Grape (Vitis vinifera)
H.chilotes (Haplochromis chilotes)
H.red_tail_sheller (Haplochromis sp. red...
Haemophilus ducreyi 35000HP
Haemophilus influenzae
Haemophilus influenzae (strain ATCC 5190...
Haloarcula marismortui (strain ATCC 4304...
Halobacterium sp NRC 1
Helianthus annuus
Helicobacter hepaticus ATCC51449
Helicobacter pylori 26695
Helicobacter pylori J99
Hevea brasiliensis
Homo sapiens (human)
Homo sapiens/Mus musculus
Honey Bee ( Apis mellifera )
Honeybee
Hordeum vulgare
Human
Human Cancer Gene Index
Human Immunodeficiency virus
Hyacinthus orientalis
Ice Plant
Idiomarina loihiensis L2TR
Ipomoea batatas
Ipomoea nil
Ipomoea trifida
K. lactis
Kalanchoe fedtschenkoi
KillFish ( Fundulus heteroclitus)
Kluyveromyces lactis
Lactobacillus acidophilus NCFM
Lactobacillus johnsonii NCC 533
Lactobacillus plantarum
Lactobacillus plantarum WCFS1
Lactococcus lactis
Lactococcus lactis subsp. lactis Il1403
Legionella pneumophila (subsp. pneumophi...
Legionella pneumophila Lens
Legionella pneumophila Paris
Leifsonia xyli subsp. xyli CTCB07
Leishmania braziliensis
Leishmania infantum
Leishmania sp.
Leptospira interrogans (serogroup Ictero...
Leptospira interrogans (serogroup Ictero...
Lettuce
Lettuce (Lactuca sativa)
Lilium longiflorum
Listeria innocua
Listeria innocua Clip11262
Listeria monocytogenes (serovar 1/2a + s...
Listeria monocytogenes (serovar 4b / F23...
Lophopyrum elongatum
Lotus japonicus
Lycopersicon pimpinellifolium
Lycopersicon esculentum (Tomato)
Macaca mulatta
Magnaporthe grisea
Maize (Zea mays)
Malus domestica
Mammalian
Mannheimia succiniciproducens MBEL55E
Marchantia polymorpha
Matricaria chamomilla
Medicago sativa
Medicago sativa subsp. X varia
Medicago truncatula
Mesembryanthemum crystallinum
Mesoplasma florum L1
Mesorhizobium loti
Metazoa
Methanobacterium thermoautotrophicum str...
Methanococcus jannaschii DSM 2661
Methanococcus maripaludis S2
Methanopyrus kandleri AV19
Methanosarcina acetivorans str. C2A
Methanosarcina mazei (strain OCM 88 / DS...
Methylococcus capsulatus str. Bath
Momordica charantia
Monodelphis domestica
Mosquito
Mouse
Mus musculus (Mouse)
Musa sp.
Mycobacterium bovis AF2122/97
Mycobacterium leprae strain TN
Mycobacterium paratuberculosis (strain k...
Mycobacterium tuberculosis CDC1551
Mycobacterium tuberculosis H37Rv
Mycoplasma
Mycoplasma gallisepticum str. R
Mycoplasma genitalium G-37
Mycoplasma hyopneumoniae 232
Mycoplasma mobile 163K
Mycoplasma mycoides (subsp. mycoides SC ...
Mycoplasma penetrans HF-2
Mycoplasma pneumoniae
Mycoplasma pneumoniae M129
Mycoplasma pulmonis UAB CTIP
Nanoarchaeum equitans Kin4-M
Nasonia vitripennis
Neisseria gonorrhoeae FA 1090
Neisseria meningitidis (serogroup A / A ...
Neisseria meningitidis (serogroup B / B ...
Nematode
Neospora caninum
Neurospora crassa
Nicotiana benthamiana
Nicotiana sylvestris
Nicotiana tabacum
Nitrosomonas europaea ATCC 19718
Nocardia farcinica IFM 10152
Nostoc sp PCC 7120
Oceanobacillus iheyensis HTE831
Oenothera elata subsp. hookeri
Olea europaea
Onchocerca volvulus
Oncorhynchus mykiss
Onion (Allium cepa)
Onion yellows phytoplasma (strain OY-M)
Ornithorhynchus anatinus
Oryza longistaminata
Oryza sativa
Oryza sativa subsp. indica
Oryza sativa subsp. japonica
Oryza sp.
Oryzias latipes (Japanese Medaka)
Ovis aries
Pan troglodytes
Parachlamydia sp. (subsp. Acanthamoeba s...
Paramecium tetraurelia
Pasteurella multocida Pm70
Pennisetum glaucum
Pepper (Capsicum annuum)
Persea americana
Petroselinum crispum
Petunia hybrida
Petunia x hybrida
Phaseolus vulgaris
Photobacterium profundum) (strain SS9)
Photorhabdus luminescens Laumondii TTO1
Physcomitrella patens
Picea abies
Picea mariana
Picea sitchensis
Pichia stipitis
Picrophilus torridus DSM 9790
Pig
Pine (Pinus)
Pinus pinea
Pinus taeda
Pisum sativum
Plant
Plants
Plasmodium berghei
Plasmodium chabaudi
Plasmodium falciparum
Plasmodium vivax
Plasmodium yoelii
Plasmodium yoelii yoelii
Pneumocystis carinii
Poplar (Populus)
Populus nigra
Porcine (Sus scrofa)
Porphyromonas gingivalis W83
Potato (Solanum tuberosum)
Prochlorococcus marinus CCMP1375
Prochlorococcus marinus MIT 9313
Prochlorococcus marinus subsp. pastoris ...
Propionibacterium acnes KPA171202
Prunus armeniaca
Pseudomonas aeruginosa
Pseudomonas aeruginosa PAO1
Pseudomonas fluorescens (strain Pf-5 / A...
Pseudomonas putida
Pseudomonas putida KT2440
Pseudomonas syringae
Pseudomonas syringae (pathovar tomato + ...
Pyrobaculum aerophilum IM2
Pyrococcus abyssi GE5
Pyrococcus furiosus DSM 3638
Pyrococcus horikoshii (strain OT3)
Pyrococcus kodakaraensis (strain KOD1)
R.appendiculatus (Rhipicephalus appendic...
Rainbow Trout
Rainbow Trout (Oncorhynchus mykiss)
Ralstonia solanacearum
Ralstonia solanacearum (strain GMI1000)
Raphanus sativus
Rat
Rat (Rattus norvegicus)
Rattus
Rattus norvegicus
Rhizobium loti (strain MAFF303099)
Rhizobium meliloti (strain 1021)
Rhodopirellula baltica (strain 1)
Rhodopseudomonas palustris (strain ATCC ...
Rice
Rice (Oryza sativa)
Ricinus communis
Rickettsia conorii (strain Malish 7)
Rickettsia felis (strain URRWXCal2)
Rickettsia prowazekii (strain Madrid E)
Rickettsia typhi (strain Wilmington)
Rubus idaeus
Rye
Rye (Secale cereale)
S. cerevisiae
S. pombe
S.officinarum (Saccharum officinarum)
Saccharomyces cerevisiae
Salmon (Salmo Salar)
Salmonella choleraesuis (strain SC-B67)
Salmonella enterica Typhi
Salmonella enterica Typhi Ty2
Salmonella paratyphi-a (strain SARB42 / ...
Salmonella typhi (strain ATCC 700931 / T...
Salmonella typhi (strain CT18)
Salmonella typhi CT18
Salmonella typhi CT18 pHCM1
Salmonella typhi CT18 pHCM2
Salmonella typhi TY2
Salmonella typhimurium
Salmonella typhimurium (strain ATCC 7007...
Salmonella typhimurium LT2
Salmonella typhimurium LT2 pSLT
Salvia columbariae
Sarcocystis neurona
Schistosoma mansoni
Schizosaccharomyces pombe
Secale cereale
Shewanella oneidensis
Shewanella oneidensis MR-1
Shigella flexneri (serovar 2a + strain 2...
Shigella flexneri (serovar 2a + strain 3...
Shigella flexneri 2a 2457T
Shigella flexneri 2a 301
Shigella flexneri 2a 301 pCP301
Shigella flexneri 2a str. 301
Silicibacter pomeroyi (strain ATCC 70080...
Sinorhizobium meliloti
Solanum berthaultii
Solanum pimpinellifolium
Solanum tuberosum
Sorghum
Sorghum (Sorghum bicolor)
Sorghum bicolor
Soybean
Spinacia oleracea
Spruce (Picea)
Staphylococcus aureus aureus MSSA476
Staphylococcus aureus COL
Staphylococcus aureus MRSA252
Staphylococcus aureus Mu50
Staphylococcus aureus MW2
Staphylococcus aureus N315
Staphylococcus epidermidis
Staphylococcus epidermidis (strain ATCC ...
Staphylococcus epidermidis ATCC 12228
Streptococcus agalactiae (serovar III / ...
Streptococcus agalactiae (serovar V / V ...
Streptococcus agalactiae 2603V/R
Streptococcus agalactiae NEM316
Streptococcus mutans
Streptococcus mutans (serovar c + strain...
Streptococcus pneumoniae (strain TIGR4 /...
Streptococcus pneumoniae R6
Streptococcus pyogenes (serovar M1 + str...
Streptococcus pyogenes (serovar M18 / M1...
Streptococcus pyogenes (serovar M3 / M3 ...
Streptococcus pyogenes (serovar M3 / M3 ...
Streptococcus pyogenes (serovar M6 strai...
Streptococcus pyogenes MGAS315
Streptococcus pyogenes MGAS8232
Streptococcus thermophilus (strain ATCC ...
Streptococcus thermophilus CNRZ1066
Streptomyces avermitilis
Streptomyces avermitilis (strain NRRL 81...
Streptomyces coelicolor
Streptomyces coelicolor (strain M145 / A...
Strongylocentrotus purpuratus
Sulfolobus acidocaldarius (strain NCIB 1...
Sulfolobus solfataricus (strain DSM 1617...
Sulfolobus tokodaii 7
Sunflower (Helianthus annuus)
Sus scrofa
Symbiobacterium thermophilum IAM 14863
Synechococcus elongatus (strain BP-1)
Synechococcus sp. PCC6301
Synechococcus sp. WH 8102
Synechocystis sp. PCC 6803
Takifugu rubripes
Tetrahymena thermophila
Tetraodon nigroviridis
Theileria parva
Thermoanaerobacter tengcongensis (strain...
Thermoplasma acidophilum DSM1728
Thermoplasma volcanium GSS1
Thermotoga maritima MSB8
Thermus thermophilus (strain HB27 / ATCC...
Thermus thermophilus (strain HB8 / ATCC ...
Tobacco (Nicotiana tabacum)
Tomato
Tomato (Lycopersicon esculentum)
Tortula ruralis
Toxoplasma gondii
Tradescantia virginiana
Treponema denticola ATCC 35405
Treponema pallidum Nichols
Tribolium castaneum
Trichomonas vaginalis
Trifolium repens
Triticum aestivum
Triticum/Hordeum etc
Tropheryma whipplei str. Twist
Tropheryma whipplei TW08 27
Trypanosoma brucei
Trypanosoma cruzi
Ureaplasma parvum (serovar 3)
Ustilago maydis
Vertebrates
Vibrio cholerae (serovar O1 + strain El ...
Vibrio cholerae N16961
Vibrio fischeri (strain ATCC 700601 / ES...
Vibrio parahaemolyticus
Vibrio parahaemolyticus (serovar O3:K6 +...
Vibrio vulnificus (CMCP6)
Vibrio vulnificus (YJ016)
Vibrio vulnificus CMCP6
Vicia faba
Vigna aconitifolia
Vigna radiata
Vigna unguiculata
Viridiplantae
Virus
Viruses
Wheat
Wheat (Triticum aestivum)
Wigglesworthia glossinidia (Glossina bre...
Wigglesworthia glossinidia brevipalpis
Wolbachia pipientis wMel
Wolbachia sp. (subsp. Brugia malayi stra...
Wolinella succinogenes DSMZ 1740
Wormpep
Xanthomonas axonopodis
Xanthomonas campestris
Xanthomonas campestris (pathovar campest...
Xanthomonas oryzae (pathovar oryzae stra...
Xenopus laevis
Xenopus tropicalis
Xylella fastidiosa
Xylella fastidiosa (strain Temecula1 / A...
Xylella fastidiosa 9a5c
Y. lipolytica
Yarrowia lipolytica
Yeast
Yersinia pestis (biovar Mediaevalis + st...
Yersinia pestis (biovar Mediaevalis + st...
Yersinia pestis (biovar Orientalis + str...
Yersinia pestis CO92
Yersinia pestis CO92 plasmid pCD1
Yersinia pestis CO92 plasmid pMT1
Yersinia pestis CO92 plasmid pPCP1
Yersinia pestis KIM
Yersinia pseudotuberculosis IP 32953
Zea mays
Zebrafish
Zymomonas mobilis (strain CP4 / ZM4 / AT...
(e.g. C.elegans)
利用方法
検索のヒント
any
blast
blastn
blastp
blastx
blat
BLOCKs COBBLER
browse_only
Download
fasta
fastx
fasty
ftp
homology
ID
keyword
MegaBlast
motif
MPsrch_pp
MPsrch_ppa
pattern
psi-blast
SAGE10
SAGE14
ScanPS
snp-fasta
sqmatch
SSAHA
ssearch
swn
swp
swx
tblastn
tblastx
tfasta
tfastx
tswn
tswx
WU-blastn
WU-blastp
WU-blastx
WU-tblastn
WU-tblastx
(e.g. blast)
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